Files in Bioconductor-mirror/cellHTS2
Analysis of cell-based screens - revised version of cellHTS

.Rinstignore
.project
CHANGES
DESCRIPTION
NAMESPACE
R/AllClasses.R R/AllGenerics.R R/adjustVariance.R R/checkColumns.R R/checkControls.R R/convertOldCellHTS.R R/envisionPlateReader.R R/getDynamicRange.R R/getMeasureRepAgreement.R R/getTopTable.R R/getZfactor.R R/glossary.R R/gseaModule.R R/htmlFunctions.R R/imageScreen.R R/makePlot.R R/methods-ROC.R R/methods-cellHTS.R R/normalizePlates.R R/oneRowPerId.R R/perPlateScaling.R R/plateConfModule.R R/plateListModule.R R/plateSummariesModule.R R/plotSpatialEffects.R R/progressReport.R R/readHTAnalystData.R R/readPlateList.R R/rsa.R R/screenDescriptionModule.R R/screenResultsModule.R R/screenScriptModule.R R/screenSummaryModule.R R/settings.R R/summarizeReplicates.R R/tableOutput.R R/templateDescriptionFile.R R/write.tabdel.R R/writeHTML-methods.R R/writeReport.R R/zzz.R
data/KcViab.rda
data/KcViabSmall.rda
data/bdgpbiomart.rda
data/dualCh.rda
data/oldKcViabSmall.rda
inst/CITATION
inst/DualChannelScreen/Description.txt
inst/DualChannelScreen/Plateconf.txt
inst/DualChannelScreen/Platelist.txt
inst/DualChannelScreen/RA01D1.TXT
inst/DualChannelScreen/RA01D2.TXT
inst/DualChannelScreen/RA02D1.TXT
inst/DualChannelScreen/RA02D2.TXT
inst/DualChannelScreen/RA03D1.TXT
inst/DualChannelScreen/RA03D2.TXT
inst/DualChannelScreen/RB01D1.TXT
inst/DualChannelScreen/RB01D2.TXT
inst/DualChannelScreen/RB02D1.TXT
inst/DualChannelScreen/RB02D2.TXT
inst/DualChannelScreen/RB03D1.TXT
inst/DualChannelScreen/RB03D2.TXT
inst/DualChannelScreen/Screenlog.txt
inst/EnVisionExample/XXX_1500.csv
inst/EnVisionExample/platelist.txt
inst/KcCellTiter/Description.txt
inst/KcCellTiter/KcCellTiter0607.txt
inst/KcCellTiter/KcCellTiter0707.txt
inst/KcCellTiter/Plateconf.txt
inst/KcCellTiter/Screenlog.txt
inst/KcViab/Analysis2003.txt
inst/KcViab/Description.txt
inst/KcViab/FT01-G01.txt
inst/KcViab/FT01-G02.txt
inst/KcViab/FT02-G01.txt
inst/KcViab/FT02-G02.txt
inst/KcViab/FT03-G01.txt
inst/KcViab/FT03-G02.txt
inst/KcViab/FT04-G01.txt
inst/KcViab/FT04-G02.txt
inst/KcViab/FT05-G01.txt
inst/KcViab/FT05-G02.txt
inst/KcViab/FT06-G01.txt
inst/KcViab/FT06-G02.txt
inst/KcViab/FT07-G01.txt
inst/KcViab/FT07-G02.txt
inst/KcViab/FT08-G01.txt
inst/KcViab/FT08-G02.txt
inst/KcViab/FT09-G01.txt
inst/KcViab/FT09-G02.txt
inst/KcViab/FT10-G01.txt
inst/KcViab/FT10-G02.txt
inst/KcViab/FT11-G01.txt
inst/KcViab/FT11-G02.txt
inst/KcViab/FT12-G01.txt
inst/KcViab/FT12-G02.txt
inst/KcViab/FT13-G01.txt
inst/KcViab/FT13-G02.txt
inst/KcViab/FT14-G01.txt
inst/KcViab/FT14-G02.txt
inst/KcViab/FT15-G01.txt
inst/KcViab/FT15-G02.txt
inst/KcViab/FT16-G01.txt
inst/KcViab/FT16-G02.txt
inst/KcViab/FT17-G01.txt
inst/KcViab/FT17-G02.txt
inst/KcViab/FT18-G01.txt
inst/KcViab/FT18-G02.txt
inst/KcViab/FT19-G01.txt
inst/KcViab/FT19-G02.txt
inst/KcViab/FT20-G01.txt
inst/KcViab/FT20-G02.txt
inst/KcViab/FT21-G01.txt
inst/KcViab/FT21-G02.txt
inst/KcViab/FT22-G01.txt
inst/KcViab/FT22-G02.txt
inst/KcViab/FT23-G01.txt
inst/KcViab/FT23-G02.txt
inst/KcViab/FT24-G01.txt
inst/KcViab/FT24-G02.txt
inst/KcViab/FT25-G01.txt
inst/KcViab/FT25-G02.txt
inst/KcViab/FT26-G01.txt
inst/KcViab/FT26-G02.txt
inst/KcViab/FT27-G01.txt
inst/KcViab/FT27-G02.txt
inst/KcViab/FT28-G01.txt
inst/KcViab/FT28-G02.txt
inst/KcViab/FT29-G01.txt
inst/KcViab/FT29-G02.txt
inst/KcViab/FT30-G01.txt
inst/KcViab/FT30-G02.txt
inst/KcViab/FT31-G01.txt
inst/KcViab/FT31-G02.txt
inst/KcViab/FT32-G01.txt
inst/KcViab/FT32-G02.txt
inst/KcViab/FT33-G01.txt
inst/KcViab/FT33-G02.txt
inst/KcViab/FT34-G01.txt
inst/KcViab/FT34-G02.txt
inst/KcViab/FT35-G01.txt
inst/KcViab/FT35-G02.txt
inst/KcViab/FT36-G01.txt
inst/KcViab/FT36-G02.txt
inst/KcViab/FT37-G01.txt
inst/KcViab/FT37-G02.txt
inst/KcViab/FT38-G01.txt
inst/KcViab/FT38-G02.txt
inst/KcViab/FT39-G01.txt
inst/KcViab/FT39-G02.txt
inst/KcViab/FT40-G01.txt
inst/KcViab/FT40-G02.txt
inst/KcViab/FT41-G01.txt
inst/KcViab/FT41-G02.txt
inst/KcViab/FT42-G01.txt
inst/KcViab/FT42-G02.txt
inst/KcViab/FT43-G01.txt
inst/KcViab/FT43-G02.txt
inst/KcViab/FT44-G01.txt
inst/KcViab/FT44-G02.txt
inst/KcViab/FT45-G01.txt
inst/KcViab/FT45-G02.txt
inst/KcViab/FT46-G01.txt
inst/KcViab/FT46-G02.txt
inst/KcViab/FT47-G01.txt
inst/KcViab/FT47-G02.txt
inst/KcViab/FT48-G01.txt
inst/KcViab/FT48-G02.txt
inst/KcViab/FT49-G01.txt
inst/KcViab/FT49-G02.txt
inst/KcViab/FT50-G01.txt
inst/KcViab/FT50-G02.txt
inst/KcViab/FT51-G01.txt
inst/KcViab/FT51-G02.txt
inst/KcViab/FT52-G01.txt
inst/KcViab/FT52-G02.txt
inst/KcViab/FT53-G01.txt
inst/KcViab/FT53-G02.txt
inst/KcViab/FT54-G01.txt
inst/KcViab/FT54-G02.txt
inst/KcViab/FT55-G01.txt
inst/KcViab/FT55-G02.txt
inst/KcViab/FT56-G01.txt
inst/KcViab/FT56-G02.txt
inst/KcViab/FT57-G01.txt
inst/KcViab/FT57-G02.txt
inst/KcViab/GeneIDs_Dm_HFA_1.1.txt
inst/KcViab/Plateconf.txt
inst/KcViab/Platelist.txt
inst/KcViab/Screenlog.txt
inst/KcViab/old-Plateconf.txt
inst/KcViab/old-Screenlog.txt
inst/KcViabSmall/Description.txt
inst/KcViabSmall/FT01-G01.txt
inst/KcViabSmall/FT01-G02.txt
inst/KcViabSmall/FT02-G01.txt
inst/KcViabSmall/FT02-G02.txt
inst/KcViabSmall/FT03-G01.txt
inst/KcViabSmall/FT03-G02.txt
inst/KcViabSmall/GeneIDs_Dm_HFAsubset_1.1.txt
inst/KcViabSmall/Plateconf.txt
inst/KcViabSmall/Platelist.txt
inst/KcViabSmall/Screenlog.txt
inst/TwoWayAssay/DHA001LU1.CSV
inst/TwoWayAssay/DHA001LU2.CSV
inst/TwoWayAssay/Description.txt
inst/TwoWayAssay/GeneIDs.txt
inst/TwoWayAssay/Plateconf.txt
inst/TwoWayAssay/Platelist.txt
inst/TwoWayAssay/importData.R
inst/glossary/glossary.xml
inst/scripts/dummy.R inst/scripts/makeDatasets.R inst/scripts/parsePackage.R
inst/templates/back.gif
inst/templates/backblue.gif
inst/templates/backbluesmall.gif
inst/templates/bordercorner.gif
inst/templates/cellHTS.css
inst/templates/cellHTS.js
inst/templates/checkmark.png
inst/templates/failed.png
inst/templates/leftblue.gif
inst/templates/leftbluemid.gif
inst/templates/leftbluesmall.gif
inst/templates/leftselblue.gif
inst/templates/leftselbluemid.gif
inst/templates/leftselbluesmall.gif
inst/templates/lefttab.gif
inst/templates/lefttabsel.gif
inst/templates/logoBig.png
inst/templates/logoBigNeg.png
inst/templates/logoBigWhite.png
inst/templates/logoSmall.png
inst/templates/lupe.png
inst/templates/lupeSmall.png
inst/templates/lupeSmallbw.png
inst/templates/lupebw.png
inst/templates/midblue.gif
inst/templates/midbluemid.gif
inst/templates/midbluesmall.gif
inst/templates/midselblue.gif
inst/templates/midselbluemid.gif
inst/templates/midselbluesmall.gif
inst/templates/rightblue.gif
inst/templates/rightbluemid.gif
inst/templates/rightbluesmall.gif
inst/templates/rightselblue.gif
inst/templates/rightselbluemid.gif
inst/templates/rightselbluesmall.gif
inst/templates/righttab.gif
inst/templates/righttabsel.gif
inst/templates/sorttable.js
inst/templates/textfileIcon.jpg
inst/templates/wz_tooltip.js
inst/testscreen/RA01D1.TXT
inst/testscreen/RA01D2.TXT
inst/testscreen/RA02D1.TXT
inst/testscreen/RA02D2.TXT
inst/testscreen/RB01D1.TXT
inst/testscreen/RB01D2.TXT
inst/testscreen/RB02D1.TXT
inst/testscreen/RB02D2.TXT
inst/testscreen/description.txt
inst/testscreen/plateconf.txt
inst/testscreen/platelist211.txt
inst/testscreen/platelist212.txt
inst/testscreen/platelist213.txt
inst/testscreen/platelist221.txt
inst/testscreen/platelist222.txt
inst/testscreen/platelist233.txt
inst/testscreen/platelist241.txt
inst/testscreen/screenlog.txt
man/Bscore.Rd man/Data.Rd man/ROC-class.Rd man/ROC.Rd man/annotate.Rd man/batch.Rd man/bdgpbiomart.Rd man/buildCellHTS2.Rd man/cellHTS-class.Rd man/cellHTS2.Rd man/configurationAsScreenPlot.Rd man/configure.Rd man/convertOldCellHTS.Rd man/convertWellCoordinates.Rd man/data-KcViab.Rd man/data-KcViabSmall.Rd man/data-dualCh.Rd man/data-oldKcViabSmall.Rd man/getDynamicRange.Rd man/getEnVisionRawData.Rd man/getMeasureRepAgreement.Rd man/getTopTable.Rd man/getZfactor.Rd man/gseaModule.Rd man/imageScreen.Rd man/intensityFiles.Rd man/normalizePlates.Rd man/oneRowPerId.Rd man/plate.Rd man/plateEffects.Rd man/plotSpatialEffects.Rd man/readHTAnalystData.Rd man/readPlateList.Rd man/rsa.Rd man/scoreReplicates.Rd man/scores2calls.Rd man/setSettings.Rd man/spatialNormalization.Rd man/state.Rd man/summarizeChannels.Rd man/summarizeReplicates.Rd man/templateDescriptionFile.Rd man/updateCellHTS.Rd man/wellAnno.Rd man/write.tabdel.Rd man/writeReport.Rd man/writeTab.Rd tests/test.R
vignettes/Rnw/biomart.Rnw
vignettes/Rnw/biomart.tex
vignettes/cellhts.bib
vignettes/cellhts2.Rnw
vignettes/cellhts2Complete.Rnw
vignettes/twoChannels.Rnw
vignettes/twoWay.Rnw
Bioconductor-mirror/cellHTS2 documentation built on June 1, 2017, 5:28 a.m.