API for Bioconductor-mirror/chopsticks
The snp.matrix and X.snp.matrix classes

Global functions
Asnps Man page
Autosomes Man page
X.snp-class Man page
X.snp.matrix-class Man page
Xchromosome Man page
Xsnps Man page
[,X.snp.matrix-method Man page
[,snp.matrix-method Man page
[<-,X.snp.matrix,ANY,ANY,X.snp.matrix-method Man page
ast.lib Source code
cbind Man page
cbind,snp.matrix-method Man page
cbind2 Man page Source code
cbind2,snp.matrix,snp.matrix-method Man page
coerce,X.snp,character-method Man page
coerce,X.snp,genotype-method Man page
coerce,X.snp,numeric-method Man page
coerce,X.snp.matrix,character-method Man page
coerce,matrix,snp.matrix-method Man page
coerce,snp,character-method Man page
coerce,snp,genotype-method Man page
coerce,snp,numeric-method Man page
coerce,snp.matrix,X.snp.matrix-method Man page Man page
coerce,snp.matrix,character-method Man page
coerce,snp.matrix,numeric-method Man page
contingency.table Source code
convert.snpMatrix Man page Source code
convert.snpMatrix.dir Man page Source code
epsout.ld.snp Man page Source code
for.exercise Man page
forceHom Source code
genotype-class Man page
glm.test.control Man page Source code
guessSex Source code
haplotype-class Man page
ibs.stats Man page Source code
ibsCount Man page Source code
ibsDist Man page Source code
initialize,X.snp.matrix-method Man page
initialize,snp.matrix-method Man page
is.na,snp.matrix-method Man page
ld.snp Man page Source code
ld.with Man page Source code
ld.with,snp.matrix,character-method Man page
ld.with.internal Source code
ld.withmany Source code
niceprint Man page Source code
onLoad Source code
onUnload Source code
pair.result.ld.snp Man page Source code
plot.snp.dprime Man page Source code
print.snp.dprime Man page Source code
qq.chisq Man page Source code
rbind Man page
rbind,snp.matrix-method Man page
rbind2 Man page Source code
rbind2,snp.matrix,snp.matrix-method Man page
read.HapMap.data Man page Source code
read.pedfile.info Man page Source code
read.pedfile.map Man page Source code
read.snps.chiamo Man page Source code
read.snps.long Man page Source code
read.snps.long.old Man page Source code
read.snps.pedfile Man page Source code
read.wtccc.signals Man page Source code
row.summary Man page Source code
show,X.snp-method Man page
show,X.snp.matrix-method Man page
show,snp-method Man page
show,snp.matrix-method Man page
single.snp.tests Man page Source code
snp-class Man page
snp.cbind Man page Source code
snp.cor Man page Source code
snp.dprime-class Man page
snp.lhs.tests Man page Source code
snp.matrix-class Man page
snp.post Man page Source code
snp.pre Man page Source code
snp.rbind Man page Source code
snp.rhs.tests Man page Source code
snp.support Man page
snpMatrix Man page
snpMatrix-package Man page
snps.10 Man page
subject.data Man page
subject.support Man page
summary,X.snp.matrix-method Man page
summary,snp.matrix-method Man page
testdata Man page
write.snp.matrix Man page Source code
wtccc.sample.list Man page Source code
xxt Man page Source code
Bioconductor-mirror/chopsticks documentation built on June 1, 2017, 5:31 a.m.