Bioconductor-mirror/chroGPS: chroGPS: visualizing the epigenome

We provide intuitive maps to visualize the association between genetic elements, with emphasis on epigenetics. The approach is based on Multi-Dimensional Scaling. We provide several sensible distance metrics, and adjustment procedures to remove systematic biases typically observed when merging data obtained under different technologies or genetic backgrounds.

Getting started

Package details

AuthorOscar Reina, David Rossell
Bioconductor views Clustering Visualization
MaintainerOscar Reina <[email protected]>
LicenseGPL (>=2.14)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/chroGPS documentation built on June 1, 2017, 5:32 a.m.