API for Bioconductor-mirror/clipper
Gene Set Analysis Exploiting Pathway Topology

Global functions
addNames Source code
bestFragment Source code
bestFragmentOnPath Source code
clipper Man page Source code
clipperAllRoots Man page Source code
cliqueMeanTest Man page Source code
cliqueMixedTest Man page Source code
cliquePairedTest Man page Source code
cliqueParamTest Source code
cliqueVarianceTest Man page Source code
cmpLists Source code
completeFormat Source code
computeSimilarity Source code
computeTestValue Source code
consecutiveFragments Source code
deleteEdge Man page Source code
easyClip Man page Source code
easyLook Man page Source code
edgeList Source code
estimateCov Source code
estimateExprCov Source code
extractCliquesFromDag Source code
extractEnds Source code
extractStarts Source code
formatBestSubPath Source code
getBest Source code
getGraphEntryGenes Man page Source code
getJunctionTreePaths Man page Source code
getperms Source code
hote4mean Source code
hoteIPF Source code
hotePaired Source code
insertValue Source code
markMultiple Source code
mmmoralize Source code
multT Source code
nameCliques Man page Source code
pathQ Man page Source code
permute Source code
plotInCytoscape Man page Source code
prunePaths Man page Source code
removeNArows Source code
removeSelfLoops Source code
retrieveInvolvedGenes Source code
runCoreClipper Source code
runPathwayVar Source code
runVarianceTest Source code
symbolCount Source code
Bioconductor-mirror/clipper documentation built on June 1, 2017, 6:31 a.m.