API for Bioconductor-mirror/cn.mops
cn.mops - Mixture of Poissons for CNV detection in NGS data

Global functions
CNVDetectionResult Man page
CNVDetectionResult-class Man page Man page
CNVRanges Man page
CnvDetectionResult Man page
X Man page
XRanges Man page
calcFractionalCopyNumbers Man page
calcFractionalCopyNumbers,CNVDetectionResult-method Man page Man page
calcIntegerCopyNumbers Man page
calcIntegerCopyNumbers,CNVDetectionResult-method Man page Man page
cn.mops Man page Source code
cn.mopsC Source code
cn.mopsCE Source code
cnvdetectionresult Man page
cnvr Man page
cnvr,CNVDetectionResult-method Man page Man page
cnvs Man page
cnvs,CNVDetectionResult-method Man page Man page
convertToFastSegRes Source code
exomeCounts Man page
exomecn.mops Man page Source code
getReadCountsFromBAM Man page Source code
getSegmentReadCountsFromBAM Man page Source code
gr Man page
gr,CNVDetectionResult-method Man page Man page
haplocn.mops Man page Source code
haplocn.mopsC Source code
haplocn.mopsCE Source code
individualCall Man page
individualCall,CNVDetectionResult-method Man page Man page
iniCall Man page
iniCall,CNVDetectionResult-method Man page Man page
integerCopyNumber Man page
integerCopyNumber,CNVDetectionResult-method Man page Man page
localAssessments Man page
localAssessments,CNVDetectionResult-method Man page Man page
makeLogRatios Source code
makeRobustCNVR Man page
makeRobustCNVR,CNVDetectionResult-method Man page Man page
normalizeChromosomes Man page Source code
normalizeGenome Man page Source code
normalizedData Man page
normalizedData,CNVDetectionResult-method Man page Man page
onLoad Source code
onUnload Source code
params Man page
params,CNVDetectionResult-method Man page Man page
plot,CNVDetectionResult,missing-method Man page
plot-methods Man page
posteriorProbs Man page
posteriorProbs,CNVDetectionResult-method Man page Man page
referencecn.mops Man page Source code Source code
replaceNames Source code
sampleNames Man page
sampleNames,CNVDetectionResult-method Man page Man page
segPlot Source code
segment Man page Source code
segmentation Man page Source code
segmentation,CNVDetectionResult-method Man page Man page
segplot Man page
segplot,CNVDetectionResult-method Man page Man page
show,CNVDetectionResult-method Man page
show-methods Man page
singlecn.mops Man page Source code Source code
statmod Source code
Bioconductor-mirror/cn.mops documentation built on June 1, 2017, 6:35 a.m.