API for Bioconductor-mirror/cogena
co-expressed gene-set enrichment analysis

Global functions
AllGeneSymbols Man page
DEexprs Man page
PEI Man page Source code
Psoriasis Man page
Psoriasis,DEexprs,sampleLabel,cogena_result Man page
annotationListToMatrix Man page Source code
assignGenes Source code
cl.ID Source code
clEnrich Man page Source code
clEnrich_one Man page Source code
clusterMethods Man page
clusterMethods,cogena-method Man page
clusterMethods,cogena_methods Man page
clusterMethods,genecl-method Man page
clusterMethods,genecl_methods Man page
coExp Man page Source code
cogean_package Man page
cogena Man page
cogena-class Man page
cogena_package Man page
cogena_package-package Man page
corInCluster Man page
corInCluster,cogena-method Man page
corInCluster,cogena_methods Man page
dist.fn Source code
enrichment Man page
enrichment,cogena-method Man page
enrichment,cogena_methods Man page
gene2set Man page Source code
geneExpInCluster Man page
geneExpInCluster,cogena-method Man page
geneExpInCluster,cogena_methods Man page
geneInCluster Man page
geneInCluster,cogena-method Man page
geneInCluster,cogena_methods,cluster_methods Man page
genecl-class Man page
geneclusters Man page
geneclusters,cogena-method Man page
geneclusters,cogena_methods Man page
geneclusters,genecl-method Man page
geneclusters,genecl_methods Man page
getCellResource Source code
getCells Source code
getResource Source code
gmt2list Man page Source code
gmtlist2file Man page Source code
heatmap.3 Man page Source code
heatmapCluster Man page
heatmapCluster,cogena-method Man page
heatmapCmap Man page
heatmapCmap,cogena Man page
heatmapCmap,cogena-method Man page
heatmapPEI Man page
heatmapPEI,cogena Man page
heatmapPEI,cogena-method Man page
logfc Man page Source code
logfc, Man page
map2col Source code
mat Man page
mat,cogena-method Man page
mat,cogena_methods Man page
mat,genecl-method Man page
mat,genecl_methods Man page
nClusters Man page
nClusters,cogena-method Man page
nClusters,cogena_methods Man page
nClusters,genecl-method Man page
nClusters,genecl_methods Man page
pClusters Man page Source code
plot.sota Man page Source code
print.sota Man page Source code
sampleLabel Man page
show,cogena-method Man page
show,cogena_methods Man page
show,genecl-method Man page
sota Man page Source code
sota.init Source code
splitNode Source code
summary,cogena-method Man page
summary,cogena_methods Man page
summary,genecl-method Man page
trainLeaves Source code
upDownGene Man page
upDownGene,cogena Man page
upDownGene,cogena-method Man page
Bioconductor-mirror/cogena documentation built on June 1, 2017, 6:38 a.m.