Bioconductor-mirror/compcodeR: RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods

This package provides extensive functionality for comparing results obtained by different methods for differential expression analysis of RNAseq data. It also contains functions for simulating count data and interfaces to several packages for performing the differential expression analysis.

Getting started

Package details

AuthorCharlotte Soneson
Bioconductor views DifferentialExpression RNASeq
MaintainerCharlotte Soneson <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/compcodeR documentation built on June 1, 2017, 6:39 a.m.