Bioconductor-mirror/contiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data
Version 1.5.0

Using strand inheritance data from multiple single cells from the organism whose genome is to be assembled, contiBAIT can cluster unbridged contigs together into putative chromosomes, and order the contigs within those chromosomes.

Getting started

Package details

AuthorKieran O'Neill, Mark Hills, Mike Gottlieb
Bioconductor views CellBasedAssays Genetics GenomeAssembly QualityControl WholeGenome
MaintainerKieran O'Neill <[email protected]>
LicenseBSD_2_clause + file LICENSE
Version1.5.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/contiBAIT")
Bioconductor-mirror/contiBAIT documentation built on June 1, 2017, 6:40 a.m.