Distinguish direct from indirect interactions in gene regulation and infer combinatorial code from highly correlated variables such as transcription factor binding profiles. The package implements the Neighbourhood Consistent PC algorithm (NCPC) and draws Direct Dependence Graphs to represent dependence structure around a target variable. The package also provides a unified interface to other Graphical Modelling (Bayesian Network) packages for distinguishing direct and indirect interactions.
Package details 


Author  Robert Stojnic 
Bioconductor views  GraphAndNetwork 
Maintainer  Robert Stojnic <[email protected]> 
License  GPL3 
Version  1.21.0 
Package repository  View on GitHub 
Installation 
Install the latest version of this package by entering the following in R:

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