Man pages for Bioconductor-mirror/debrowser
debrowser: Interactive Differential Expresion Analysis Browser

actionButtonButtons including Action Buttons and Event Buttons
addDataColsaddDataCols
addIDaddID
add_title_posadd_title_pos
all2allall2all
applyFiltersapplyFilters
applyFiltersToMergedComparisonapplyFiltersToMergedComparison
bookmarkServerbookmarkServer
bookmarkUIbookmarkUI
clusterDataclusterData
compareClustcompareClust
copy2newDirectorycopy2newDirectory
correctBatchEffectCorrect Batch Effect
deServerdeServer
deUIdeUI
drawPCAExplaineddrawPCAExplained
getAfterLoadMsggetAfterLoadMsg
getColorsgetColors
getColorShapeSelectiongetColorShapeSelection
getCompSelectiongetCompSelection
getConditionSelectorgetConditionSelector
getConditionSelectorFromMetagetConditionSelectorFromMeta
getCondMsggetCondMsg
getCutOffSelectiongetCutOffSelection
getDataForTablesgetDataForTables get data to fill up tables tab
getDataPrepPanelgetDataPrepPanel
getDensityPlotgetDensityPlot
getDomainsgetDomains
getDowngetDown get down regulated data
getDownloadSectiongetDownloadSection
getEnrichDOgetEnrichDO
getEnrichGOgetEnrichGO
getEnrichKEGGgetEnrichKEGG
getGeneListgetGeneList
getGeneSetDatagetGeneSetData
getGOLeftMenugetGOLeftMenu
getGoPanelgetGoPanel
getGOPlotsgetGOPlots
getHelpButtongetHelpButton prepares a helpbutton for to go to a specific...
getHoverPlotsgetHoverPlots
getInitialMenugetInitialMenu
getIntHeatmapgetIntHeatmap
getIntHeatmapVisgetIntHeatmapVis
getIQRPlotgetIQRPlot
getJsonObjgetJsonObj
getLeftMenugetLeftMenu
getLegendSelectgetLegendSelect
getLoadingMsggetLoadingMsg
getLogogetLogo
getMainPanelgetMainPanel
getMainPanelPlotsgetMainPanelPlots
getMainPlotsLeftMenugetMainPlotsLeftMenu
getMeangetMean
getMergedComparisongetMergedComparison
getMethodDetailsget the detail boxes after DE method selected
getMostVariedListgetMostVariedList
getNormalizedMatrixgetNormalizedMatrix
getOrganismgetOrganism
getOrganismBoxgetOrganismBox
getOrganismPathwaygetOrganismPathway
getPCAexplainedgetPCAexplained
getPCselectiongetPCselection
getProgramTitlegetProgramTitle
getQCLeftMenugetQCLeftMenu
getQCPanelgetQCPanel
getQCPlotsgetQCPlots
getQCReplotgetQCReplot
getSampleNamesgetSampleNames
getSamplesgetSamples
getSearchDatagetSearchData
getSelectedColsgetSelectedCols
getSelectedDatasetInputgetSelectedDatasetInput
getSelectInputBoxgetSelectInputBox
getSelHeatgetSelHeat
getShapeColorgetShapeColor
getStartPlotsMsggetStartPlotsMsg
getStartupMsggetStartupMsg
get_state_idget_state_id
getTableStylegetTableStyle
getTextOnOffgetTextOnOff
getToolTipPCAgetToolTipPCA
getToolTipTextgetToolTipText
getUpgetUp get up regulated data
getUpDowngetUpDown get up+down regulated data
hideObjhideObj
installpackinstallpack
link_brushlink_brush
load_dataload_data.
loadpackloadpack
loadpacksloadpacks
logSliderJScodelogSliderJScode
mainScattermainScatter
MAPlotMAPlot
MAZoomMAZoom
panel.corpanel.cor
panel.histpanel.hist
plot_pcaplot_pca
prepAddQCPlotsprepAddQCPlots
prepDataContainerprepDataContainer
prepDataForQCprepDataForQC
prepDEOutputprepDEOutput
pushpush
readMetaDatareadMetaData
removeBookmarkremoveBookmark
removeColsremoveCols
round_valsround_vals
runBayseqrunBayseq
runDErunDE
runDESeqrunDESeq
runDESeq2runDESeq2
runEdgeRrunEdgeR
runHeatmaprunHeatmap
runLimmarunLimma
run_pcarun_pca
saveQCPlotsaveQCPlot
scatterZoomscatterZoom
selectBatchEffectselectBatchEffect
selectConditionsselectConditions
selectedInputselectedInput
setFilterParamssetFilterParams
showObjshowObj
startDEBrowserstartDEBrowser
textareaInputtextareaInput
togglePanelstogglePanels
volcanoPlotvolcanoPlot
volcanoZoomvolcanoZoom
Bioconductor-mirror/debrowser documentation built on Aug. 17, 2017, 3:55 p.m.