Bioconductor-mirror/derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach
Version 1.11.6

This package provides functions for annotation-agnostic differential expression analysis of RNA-seq data. Two implementations of the DER Finder approach are included in this package: (1) single base-level F-statistics and (2) DER identification at the expressed regions-level. The DER Finder approach can also be used to identify differentially bounded ChIP-seq peaks.

Getting started

Package details

Bioconductor views ChIPSeq DifferentialExpression DifferentialPeakCalling RNASeq Sequencing Software
Maintainer
LicenseArtistic-2.0
Version1.11.6
URL https://github.com/lcolladotor/derfinder
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/derfinder")
Bioconductor-mirror/derfinder documentation built on Aug. 8, 2017, 5:46 a.m.