define_cluster: Define a cluster to use.

Description Usage Arguments Details Author(s) Examples

View source: R/define_cluster.R

Description

Define a cluster to use.

Usage

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define_cluster(cores = "mc.cores", ...)

Arguments

cores

The argument to use to define the number of cores. This is useful for cases with nested parallelizations.

...

Advanced arguments are:

mc.cores

If 1 (default), then SerialParam will be used. If greater than 1, then it specifies the number of workers for SnowParam.

mc.outfile

Passed to outfile when using SnowParam.

BPPARAM.custom

If specified, that's the BPPARAM that will be used.

Details

This function is used internally in many functions.

Author(s)

Leonardo Collado-Torres

Examples

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## Use SerialParam()
define_cluster(mc.cores = 1)

## Note that BPPARAM.custom takes precedence
define_cluster(mc.cores = 2, BPPARAM.custom = BiocParallel::SerialParam())

Bioconductor-mirror/derfinder documentation built on Aug. 8, 2017, 5:46 a.m.