npci.venn.diagram: generate venn diagram for multiple fCI analysis

Description Usage Arguments Details Value Note Author(s) References See Also Examples

View source: R/plotfCI.R

Description

plot the overlap differentially expressed genes by pairwise fCI analysis

Usage

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npci.venn.diagram(diff.gene.ids, i = 1, k = 1)

Arguments

diff.gene.ids

gene ids for genes that are differentially expressed

i

number of comparisons for fCI analysis, i,e 1 or 2

k

number of genes for fCI analysis

Details

TBD

Value

figure

the venn diagram plot

Note

TBD

Author(s)

Shaojun Tang

References

http://software.steenlab.org/fCI/

See Also

TBD

Examples

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  targets.run1=c(2:10)
  targets.run2=c(1:8)
  targets.run3=c(6:12)
  diff.gene.ids=list(targets.run1, targets.run2, targets.run3)
  npci.venn.diagram(diff.gene.ids)
  

Bioconductor-mirror/fCI documentation built on June 1, 2017, 8:34 a.m.