Bioconductor-mirror/fgsea: Fast Gene Set Enrichment Analysis

The package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which allows to use accurate stantard approaches to multiple hypothesis correction.

Getting started

Package details

Bioconductor views DifferentialExpression GeneExpression GeneSetEnrichment Pathways
Maintainer
LicenseMIT + file LICENCE
Version1.3.1
URL https://github.com/ctlab/fgsea/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/fgsea")
Bioconductor-mirror/fgsea documentation built on June 1, 2017, 8:37 a.m.