Man pages for Bioconductor-mirror/fgsea
Fast Gene Set Enrichment Analysis

calcGseaStatCalculates GSEA statistics for a given query gene set
examplePathwaysExample list of mouse Reactome pathways.
exampleRanksExample vector of gene-level statistics obtained for Th1...
fgseaRuns preranked gene set enrichment analysis.
gmtPathwaysReturns a list of pathways from a GMT file.
plotEnrichmentPlots GSEA enrichment plot.
plotGseaTablePlots table of enrichment graphs using ggplot and gridExtra.
reactomePathwaysReturns a list of Reactome pathways for given Entrez gene IDs
Bioconductor-mirror/fgsea documentation built on June 1, 2017, 8:37 a.m.