Files in Bioconductor-mirror/flipflop
Fast lasso-based isoform prediction as a flow problem

DESCRIPTION
NAMESPACE
R/ModelSelection.R R/PoissonLoss.R R/WrapperFlipFlop.R R/WriteOutput.R R/bins_paired.R R/collect_path_grouplasso.R R/duality_gap_poisson.R R/duality_gap_poisson_graph.R R/ff_spams.R R/flipflop.R R/graph_paired.R R/graph_single.R R/grouplassoPoisson.R R/max_lambda.R R/processsam.R R/refitPoisson.R R/refitSamples.R R/regularization_path.R R/regularization_path_grouplasso_dich.R R/spamsff.R R/tictoc.R R/utils.R
inst/CITATION
inst/COPYING
inst/NEWS
inst/extdata/flipflop.Rex
inst/extdata/vignette-annot.bed.txt
inst/extdata/vignette-sam.txt
inst/scripts/generateManPages.R man/flipflop.Rd
src/FileSplitter.cpp
src/FileSplitter.h
src/Makevars
src/R_init_flipflop.c
src/R_init_flipflop.h
src/Rinterface.h
src/align.cpp
src/align.h
src/auxiliaryio.cpp
src/auxiliaryio.h
src/bedio.cpp
src/bedio.h
src/common.cpp
src/common.h
src/commontype.h
src/cvganalysis.cpp
src/cvganalysis.h
src/ffProcesssam.cpp
src/instanceio.cpp
src/instanceio.h
src/parseopt.cpp
src/parseopt.h
src/rangeset.cpp
src/rangeset.h
src/readgroup.cpp
src/readgroup.h
src/samio.cpp
src/samio.h
src/samples.cpp
src/samples.h
src/spams.cpp
src/spams.h
src/spams/dags/dag.h
src/spams/decomp/decomp.h
src/spams/linalg/cblas_alt_template.h
src/spams/linalg/cblas_defvar.h
src/spams/linalg/cblas_template.h
src/spams/linalg/linalg.h
src/spams/linalg/list.h
src/spams/linalg/mexutils.h
src/spams/linalg/misc.h
src/spams/linalg/utils.h
src/spams/prox/fista.h
src/spams/prox/project.h
src/structdef.cpp
src/structdef.h
src/utils.h
vignettes/biblio.bib
vignettes/flipflop.Rnw
Bioconductor-mirror/flipflop documentation built on June 1, 2017, 8:37 a.m.