getNormM: Computes M values,log2(Meth/Unmeth), from normalized signals

Description Usage Arguments Value Methods (by class) Examples

Description

Computes M values,log2(Meth/Unmeth), from normalized signals

Usage

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getNormM(object)

## S4 method for signature 'SampleSet'
getNormM(object)

Arguments

object

An object of class SampleSet

Value

a matrix containing M values, log2(Meth/Unmeth), after normalization

Methods (by class)

Examples

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require(minfiData)
pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
mySampleSet=fromRGChannelSet(RGsetEx)
m=getNormM(funtooNorm(mySampleSet))

Bioconductor-mirror/funtooNorm documentation built on May 9, 2017, 12:22 a.m.