chunkData: chunkData is a private function to read in a chunk and...

Description Usage Arguments Value

View source: R/VCFData.R

Description

chunkData is a private function to read in a chunk and process it. This is a private function and is not meant to be called by the user. An example is provided in line with bioconductor policies.

Usage

1
chunkData(myfn, genome, svp, admixture.ref)

Arguments

myfn

Filename/path of file

genome

GRCh37 or GRCh38

svp

Params specified for readVCFAsVRanges

admixture.ref

VRanges with MAF for superpopulations (EAS, AFR, EUR)

Value

VRanges of single processed chromosome


Bioconductor-mirror/genotypeeval documentation built on June 1, 2017, 9:43 a.m.