rareCompare: Comparator to rare variants. Rare is defined as 0.01 percent...

Description Usage Arguments Value

Description

Comparator to rare variants. Rare is defined as 0.01 percent or less

Usage

1
rareCompare(x, gr, percent.h)

Arguments

x

myvcf of interest

gr

GRanges of gold comparator

percent.h

what percent higher hets than hom_alt?

Value

list with name, logical (passed or not), numeric (proportion hets in rare)


Bioconductor-mirror/genotypeeval documentation built on June 1, 2017, 9:43 a.m.