Bioconductor-mirror/globaltest: Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing

The global test tests groups of covariates (or features) for association with a response variable. This package implements the test with diagnostic plots and multiple testing utilities, along with several functions to facilitate the use of this test for gene set testing of GO and KEGG terms.

Getting started

Package details

AuthorJelle Goeman and Jan Oosting, with contributions by Livio Finos and Aldo Solari
Bioconductor views Bioinformatics DifferentialExpression GO Microarray OneChannel Pathways
MaintainerJelle Goeman <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/globaltest documentation built on June 1, 2017, 9:45 a.m.