Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)

boot2fuzzy | function to write MapleTree files for viewing bootstrap... |

bootplot | function to make a barplot of bootstrap estimated cluster... |

bootstrap | functions to perform non-parametric bootstrap resampling of... |

correlationordering | function to compute empirical correlation between distance in... |

disscosangle | Functions to compute pair-wise distances |

distancematrix | functions to compute pair wise distances between vectors |

dplot | function to make a pseudo-color image of a distance matrix... |

golub | Gene expression dataset from Golub et al. (1999) |

hdist-class | Class "hdist" - S4 class to hold distance matrices. |

hopach | function to perform HOPACH hierarchical clustering |

hopach2tree | function to write MapleTree files for viewing hopach... |

hopach.internal | Functions used internally by the hopach package |

labelstomss | Functions to compute silhouettes and split silhouettes |

makeoutput | function to write a text file with hopach output |

prune | function to prune a HOPACH tree. |

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