API for Bioconductor-mirror/limmaGUI
GUI for limma package with two color microarrays

Global functions
AboutLimmaGUI Man page Source code
AboutNormalization Man page Source code
BChelp Man page Source code
ChooseContrastsParameterization Man page Source code
ChooseEbayesStatistic Man page Source code
ChooseParameterization Man page Source code
ChoosePlotSymbolByClicking Man page Source code
ChooseSpotType Man page Source code
ComputeContrasts Man page Source code
ComputeLinearModelFit Man page Source code
CopyGraph Man page Source code
CreateNewParameterization Man page Source code
CreateTreeAndList Man page Source code
DeleteContrastsParameterization Man page Source code
DeleteParameterization Man page Source code
DupCorBoxPlot Man page Source code
ExportAvalues Man page Source code
ExportHTMLreport Man page Source code
ExportMvalues Man page Source code
ExportTopTable Man page Source code
GetBackgroundCorrectionMethod Man page Source code
GetBetweenArrayNormalizationMethod Man page Source code
GetCoef Man page Source code
GetComponentsToExportInHTMLreport Man page Source code
GetContrastsParameterizationName Man page Source code
GetContrastsParameterizationNames Man page Source code
GetDEcutoff Man page Source code
GetDesignOrContrasts Man page Source code
GetGeneLabelsOptions Man page Source code
GetGenePixFlagWeightings Man page Source code
GetImageAnalysisColumnHeadings Man page Source code
GetImageProcessingFileType Man page Source code
GetJpegOrPngParams Man page Source code
GetJpegOrPngX11Params Man page Source code
GetLowessType Man page Source code
GetNEWxlim Man page Source code
GetNormexpOffsetValue Man page Source code
GetNumParametersNoTargets Man page Source code
GetPValueCutoff Man page Source code
GetParameterNames Man page Source code
GetParameterizationName Man page Source code
GetParametersAndOrContrasts Man page Source code
GetPlotLabels Man page Source code
GetPlotSize Man page Source code
GetPlotTitle Man page Source code
GetRNATypesFrom.ContrastsFromDropDowns.String Man page Source code
GetReducedDuplicateSpacing Man page Source code
GetSlideNum Man page Source code
GetSpotTypesForLinearModel Man page Source code
GetSpotTypesIncludedNames Man page Source code
GetWithinArrayNormalizationMethod Man page Source code
GetWtAreaParams Man page Source code
GetlimmaDataSetName Man page Source code
GetlmFitMethod Man page Source code
HTMLplotUsingFunction Man page
HeatDiagramDialog Man page Source code
HeatDiagramPlot Man page Source code
HowManyDups Man page Source code
ImageArrayPlot Man page Source code
ImageArrayPlotDialog Man page Source code
ImportMA Man page Source code
ImportMADialog Man page Source code
InitNewParameterization Man page Source code
LGchangeLog Man page Source code
LogOddsPlot Man page Source code
MAPlot Man page Source code
MAPlotAvg Man page Source code
MBoxPlot Man page Source code
MMPlot Man page Source code
NewLimmaFile Man page Source code
NormalizeNow Man page Source code
OpenALimmaFile Man page Source code
OpenGALFile Man page Source code
OpenGALandTargetsandSpotTypesfiles Man page Source code
OpenLimmaFile Man page Source code
OpenSpotTypesFile Man page Source code
OpenTargetsFile Man page Source code
PlotOptions Man page Source code
PrintTipGroupMAPlot Man page Source code
QQTplot Man page Source code
ReadImageProcessingFiles Man page Source code
Require Man page Source code
Resize Man page Source code
SaveAsLimmaFile Man page Source code
SaveGraphAsJpeg Man page Source code
SaveGraphAsPDF Man page Source code
SaveGraphAsPNG Man page Source code
SaveGraphAsPostscript Man page Source code
SaveLimmaFile Man page Source code
SelectPlotSymbols Man page Source code
SetLayoutParameters Man page Source code
SetWD Man page Source code
SetupPlotKeyBindings Man page Source code
SetupPlotMenus Man page Source code
SimplifyContrastsExpression Man page Source code
TclRequire Man page Source code
Try Man page Source code
TryReadImgProcFile Man page Source code
UpDownOrBoth Man page Source code
UpdateSpotTypesStatus Man page Source code
VennDiagramPlot Man page Source code
ViewDesignOrContrastsMatrixAsPairs Man page Source code
ViewDesignOrContrastsMatrixInTable Man page Source code
ViewExistingContrastsParameterization Man page Source code
ViewExistingParameterization Man page Source code
ViewRNATargets Man page Source code
ViewSpotTypes Man page Source code
WithinBetweenOrBoth Man page Source code
chooseDir Man page Source code
deleteItemFromList Man page Source code
ebayesBoxPlots Man page Source code
evalRcode Man page Source code
fixSeps Man page Source code
getPackageVersion Man page Source code
imageplotlimmaGUI Man page Source code
initGlobals Man page Source code
limmaGUI Man page Source code
limmaGUIhelp Man page Source code
limmaHelp Man page Source code
lmFitMethodHelp Man page Source code
nstrstr Man page Source code
onAttach Source code
onDestroy Man page Source code
onExit Man page Source code
plotMAColorCoded Man page Source code
read.marrayTools Man page Source code
readGALlimmaGUI Man page
showChangeLog Man page Source code
showCitations Man page Source code
showGAL Man page Source code
showTopTable Man page Source code
strstr Man page Source code
tclArrayVar Man page Source code
vennDiagramlimmaGUI Man page Source code
wtflags2 Man page Source code
Bioconductor-mirror/limmaGUI documentation built on June 1, 2017, 10:50 a.m.