The 'msa' package provides a unified R/Bioconductor interface to the multiple sequence alignment algorithms ClustalW, ClustalOmega, and Muscle. All three algorithms are integrated in the package, therefore, they do not depend on any external software tools and are available for all major platforms. The multiple sequence alignment algorithms are complemented by a function for pretty-printing multiple sequence alignments using the LaTeX package TeXshade.
|Author||Enrico Bonatesta, Christoph Horejs-Kainrath, Ulrich Bodenhofer|
|Bioconductor views||Alignment MultipleComparison MultipleSequenceAlignment Sequencing|
|Maintainer||Ulrich Bodenhofer <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.