Bioconductor-mirror/nethet: A bioconductor package for high-dimensional exploration of biological network heterogeneity

Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).

Getting started

Package details

AuthorNicolas Staedler, Frank Dondelinger
Bioconductor views Clustering GraphAndNetwork
MaintainerNicolas Staedler <[email protected]>, Frank Dondelinger <[email protected]>
LicenseGPL-2
Version1.9.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/nethet")
Bioconductor-mirror/nethet documentation built on June 1, 2017, 12:50 p.m.