Bioconductor-mirror/nucleoSim: Generate synthetic nucleosome maps

This package can generate a synthetic map with reads covering the nucleosome regions as well as a synthetic map with forward and reverse reads emulating next-generation sequencing. The user has choice between three different distributions for the read positioning: Normal, Student and Uniform.

Getting started

Package details

AuthorRawane Samb [aut], Astrid Deschênes [cre, aut], Pascal Belleau [aut], Arnaud Droit [aut]
Bioconductor views Alignment Genetics Sequencing Software StatisticalMethod
MaintainerAstrid Deschenes <[email protected]>
LicenseArtistic-2.0
Version1.5.0
URL https://github.com/arnauddroitlab/nucleoSim
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/nucleoSim")
Bioconductor-mirror/nucleoSim documentation built on June 1, 2017, 1:44 p.m.