OpenmRNABam: This function loads Bam files generated by local mapping with...

Description Usage Author(s)

Description

The function creates and expressionSet starting from the association of reads mapped by Bowtie using chromosome oriented mapping controlled by oneChannelGUI and associate those mapping to gene-level regions extracted by UCSC browser. IMPORTANT at the present time the expression set is base on gene-level data and not on exon-level data.

Usage

1

Author(s)

Raffaele A Calogero


Bioconductor-mirror/oneChannelGUI documentation built on July 28, 2017, 5:23 a.m.