extractAffyids: Extracting probe ids associated to a specific Gene Ontology...

Description Usage Details Note Author(s) See Also

Description

It is possible to identify the affy ids associated to a specific GO term using the extractAffyids function.

Usage

1

Details

The function asks to the user to select a file containing probe set ids separated by carriage return. The file should contain only one column and no header. The user is also asked to select a specific GO term. The probe sets associated to the specific GO term will be annotated ans saved in a HTML file.

Note

For the annotation the annotation library associated to the raw data loaded in the affylmGUI environment is used.

Author(s)

Raffaele A. Calogero

See Also

GOenrichment, plotGO


Bioconductor-mirror/oneChannelGUI documentation built on July 28, 2017, 5:23 a.m.