makeSam: makeSam

Description Usage Details Author(s)

View source: R/dexseq.R

Description

This function uses samtools to convert a bam file in a sam file. It assumes that the bam file was generated by TopHat. Therefore it searches for accepted_hits.bam in the folder.

Usage

1

Details

This function uses samtools to convert a bam file in a sam file. It assumes that the bam file was generated by TopHat. Therefore it searches for accepted_hits.bam in the folder. It produces a file named accepted_hits.sam.

Author(s)

Raffaele A Calogero


Bioconductor-mirror/oneChannelGUI documentation built on July 28, 2017, 5:23 a.m.