API for Bioconductor-mirror/ontoCAT
Ontology traversal and search

Global functions
Ontology-class Man page
OntologyTerm-class Man page
getAccession Man page
getAccession,OntologyTerm-method Man page
getAllTermChildren Man page
getAllTermChildren,Ontology,OntologyTerm-method Man page
getAllTermChildrenById Man page
getAllTermChildrenById,Ontology,character-method Man page
getAllTermIds Man page
getAllTermIds,Ontology-method Man page
getAllTermParents Man page
getAllTermParents,Ontology,OntologyTerm-method Man page
getAllTermParentsById Man page
getAllTermParentsById,Ontology,character-method Man page
getAllTerms Man page
getAllTerms,Ontology-method Man page
getEFO Man page Source code
getEFOBranchRootIds Man page
getEFOBranchRootIds,Ontology-method Man page
getLabel Man page
getLabel,OntologyTerm-method Man page
getOntology Man page Source code
getOntologyAccession Man page
getOntologyAccession,Ontology-method Man page
getOntologyDescription Man page
getOntologyDescription,Ontology-method Man page
getOntologyNoReasoning Man page Source code
getOntologyRelationNames Man page
getOntologyRelationNames,Ontology-method Man page
getRootIds Man page
getRootIds,Ontology-method Man page
getRoots Man page
getRoots,Ontology-method Man page
getTermAndAllChildren Man page
getTermAndAllChildren,Ontology,OntologyTerm-method Man page
getTermAndAllChildrenById Man page
getTermAndAllChildrenById,Ontology,character-method Man page
getTermById Man page
getTermById,Ontology,character-method Man page
getTermChildren Man page
getTermChildren,Ontology,OntologyTerm-method Man page
getTermChildrenById Man page
getTermChildrenById,Ontology,character-method Man page
getTermDefinitions Man page
getTermDefinitions,Ontology,OntologyTerm-method Man page
getTermDefinitionsById Man page
getTermDefinitionsById,Ontology,character-method Man page
getTermNameById Man page
getTermNameById,Ontology,character-method Man page
getTermParents Man page
getTermParents,Ontology,OntologyTerm-method Man page
getTermParentsById Man page
getTermParentsById,Ontology,character-method Man page
getTermRelationNames Man page
getTermRelationNames,Ontology,OntologyTerm-method Man page
getTermRelationNamesById Man page
getTermRelationNamesById,Ontology,character-method Man page
getTermRelations Man page
getTermRelations,Ontology,OntologyTerm,character-method Man page
getTermRelationsById Man page
getTermRelationsById,Ontology,character,character-method Man page
getTermSynonyms Man page
getTermSynonyms,Ontology,OntologyTerm-method Man page
getTermSynonymsById Man page
getTermSynonymsById,Ontology,character-method Man page
hasTerm Man page
hasTerm,Ontology,character-method Man page
isEFOBranchRoot Man page
isEFOBranchRoot,Ontology,OntologyTerm-method Man page
isEFOBranchRootById Man page
isEFOBranchRootById,Ontology,character-method Man page
isRoot Man page
isRoot,Ontology,OntologyTerm-method Man page
isRootById Man page
isRootById,Ontology,character-method Man page
onLoad Source code
ontoCAR Man page
ontoCAR-package Man page
searchTerm Man page
searchTerm,Ontology,character-method Man page
searchTermPrefix Man page
searchTermPrefix,Ontology,character-method Man page
show,OntologyTerm-method Man page
showHierarchyDownToTerm Man page
showHierarchyDownToTerm,Ontology,OntologyTerm-method Man page
showHierarchyDownToTermById Man page
showHierarchyDownToTermById,Ontology,character-method Man page
showPathsToTerm Man page
showPathsToTerm,Ontology,OntologyTerm-method Man page
showPathsToTermById Man page
showPathsToTermById,Ontology,character-method Man page
Bioconductor-mirror/ontoCAT documentation built on June 1, 2017, 1:47 p.m.