Bioconductor-mirror/rain: Rhythmicity Analysis Incorporating Non-parametric Methods

This package uses non-parametric methods to detect rhythms in time series. It deals with outliers, missing values and is optimized for time series comprising 10-100 measurements. As it does not assume expect any distinct waveform it is optimal or detecting oscillating behavior (e.g. circadian or cell cycle) in e.g. genome- or proteome-wide biological measurements such as: micro arrays, proteome mass spectrometry, or metabolome measurements.

Getting started

Package details

AuthorPaul F. Thaben, Pål O. Westermark
Bioconductor views Genetics Microarray MultipleComparison Proteomics SystemsBiology TimeCourse
MaintainerPaul F. Thaben <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/rain documentation built on June 1, 2017, 3:51 p.m.