Bioconductor-mirror/safe: Significance Analysis of Function and Expression

SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.

Getting started

Package details

AuthorWilliam T. Barry
Bioconductor views DifferentialExpression GeneSetEnrichment Pathways Software StatisticalMethod
MaintainerWilliam T. Barry <[email protected]>
LicenseGPL (>= 2)
Version3.17.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/safe")
Bioconductor-mirror/safe documentation built on June 7, 2017, 3:10 p.m.