Man pages for Bioconductor-mirror/topGO
Enrichment Analysis for Gene Ontology

annFUNFunctions which map gene identifiers to GO terms
classicCount-classClass "classicCount"
classicExpr-classClass "classicExpr"
classicScore-classClass "classicScore"
dagFunctionsUtility functions to work with Directed Acyclic Graphs (DAG)
diagnosticMethodsDiagnostic functions for topGOdata and topGOresult objects.
elimCount-classClasses "elimCount" and "weight01Count"
elimExpr-classClass "elimExpr"
elimScore-classClasses "elimScore" and "weight01Score"
geneListA toy example of a list of gene identifiers and the...
getPvaluesConvenient function to compute p-values from a gene...
getSigGroupsInterfaces for running the enrichment tests
GOdataSample topGOdata and topGOresult objects
GOTestsGene set tests statistics
groupGOTermsGrouping of GO terms into the three ontologies
groupStats-classClass "groupStats"
inducedGraphThe subgraph induced by a set of nodes.
parentChild-classClasses "parentChild" and "pC"
printGraph-methodsVisualisation functions
topGOdata-classClass "topGOdata"
topGO-packageEnrichment analysis for Gene Ontology
topGOresult-classClass "topGOresult"
weightCount-classClass "weightCount"
Bioconductor-mirror/topGO documentation built on June 1, 2017, 7:14 p.m.