Bioconductor-mirror/triform: Triform finds enriched regions (peaks) in transcription factor ChIP-sequencing data

The Triform algorithm uses model-free statistics to identify peak-like distributions of TF ChIP sequencing reads, taking advantage of an improved peak definition in combination with known profile characteristics.

Getting started

Package details

AuthorKarl Kornacker Developer [aut], Tony Handstad Developer [aut, cre]
Bioconductor views ChIPSeq Sequencing
MaintainerThomas Carroll <[email protected]>
LicenseGPL-2
Version1.19.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/triform")
Bioconductor-mirror/triform documentation built on June 1, 2017, 8:01 p.m.