Bioconductor/AnnotationHub: Client to access AnnotationHub resources

This package provides a client for the Bioconductor AnnotationHub web resource. The AnnotationHub web resource provides a central location where genomic files (e.g., VCF, bed, wig) and other resources from standard locations (e.g., UCSC, Ensembl) can be discovered. The resource includes metadata about each resource, e.g., a textual description, tags, and date of modification. The client creates and manages a local cache of files retrieved by the user, helping with quick and reproducible access.

Getting started

Package details

AuthorMartin Morgan [cre], Marc Carlson [ctb], Dan Tenenbaum [ctb], Sonali Arora [ctb], Lori Shepherd [ctb]
Bioconductor views DataImport GUI Infrastructure ThirdPartyClient
MaintainerBioconductor Package Maintainer <[email protected]>
LicenseArtistic-2.0
Version2.15.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor/AnnotationHub")
Bioconductor/AnnotationHub documentation built on Dec. 5, 2018, 10:15 p.m.