disjointExons extracts the non-overlapping exon parts from a
TxDb object or any other supported object.
disjointExons is deprecated in BioC 3.13. Please use
1 2 3 4 5
A TxDb object or any other supported object.
Arguments to be passed to methods.
disjointExons creates a GRanges of
non-overlapping exon parts with metadata columns of gene_id and exonic_part.
Exon parts that overlap more than 1 gene can be dropped with
tx_name metadata column is included that lists all
transcript names that overlap the exon fragment. This function
prepareAnnotationForDEXSeq in the DEXSeq
A GRanges object.
disjointExons was originally implemented by Mike Love and Alejandro
Reyes and then moved (and adapted) to GenomicFeatures by Valerie
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