DNAStringSetToGR: Convert DNAStringSet to GenomicRanges
In CellFateNucOrg/nanodsmf: Analyse nanopore dual enzyme single molecule footprinting data (nanoDSMF)
Description
Usage
Arguments
Value
Examples
Description
Convert DNAStringSet to GenomicRanges
Usage
1
DNAStringSetToGR(DNAss, defaultStrand = "*")
Arguments
DNAss
A DNAStringSet
defaultStrand
One of "+", "-" or "*" for the strand from which the sequences come from (default="*")
Value
A GenomicRanges object
Examples
1
DNAstringsetToGR(Biostrings::DNAStringSet(x=c(chr1="agctgtagct",chr2="agagagagttt"))
CellFateNucOrg/nanodsmf documentation built on July 23, 2020, 4:57 p.m.
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Description Usage Arguments Value Examples
Description
Convert DNAStringSet to GenomicRanges
Usage
1 | DNAStringSetToGR(DNAss, defaultStrand = "*")
|
Arguments
DNAss |
A DNAStringSet |
defaultStrand |
One of "+", "-" or "*" for the strand from which the sequences come from (default="*") |
Value
A GenomicRanges object
Examples
1 | DNAstringsetToGR(Biostrings::DNAStringSet(x=c(chr1="agctgtagct",chr2="agagagagttt"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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