initialize-CogapsResult-method: Constructor for CogapsResult

In CoGAPS/CoGAPS: Coordinated Gene Activity in Pattern Sets

Constructor for CogapsResult

Description

Constructor for CogapsResult

Usage

## S4 method for signature 'CogapsResult'
initialize(
  .Object,
  Amean,
  Pmean,
  Asd,
  Psd,
  meanChiSq,
  geneNames,
  sampleNames,
  diagnostics = NULL,
  ...
)

Arguments

.Object	CogapsResult object
Amean	mean of sampled A matrices
Pmean	mean of sampled P matrices
Asd	std dev of sampled A matrices
Psd	std dev of sampled P matrices
meanChiSq	mean value of ChiSq statistic
geneNames	names of genes in data
sampleNames	names of samples in data
diagnostics	assorted diagnostic reports from the run
...	initial values for slots

Value

initialized CogapsResult object

CoGAPS/CoGAPS documentation built on April 12, 2024, 3:12 a.m.