Choose: Manually map parameters for the historical period of...
In DLMtool/DLMtool: Data-Limited Methods Toolkit

Description Usage Arguments Details Value Author(s)

Interactive plots to specify trends and variability in fishing effort, fleet selectivity, and natural mortality for the operating model.

ChooseEffort(Fleet, Years = NULL)

ChooseM(OM, type = c("age", "length"), x = NULL, y = NULL)

ChooseSelect(Fleet, Stock, FstYr = NULL, SelYears = NULL)

`Fleet`	A fleet object.
`Years`	An optional vector of years. Should be nyears long.
`OM`	An object of class 'OM'
`type`	A character string - is M to be mapped by 'age' or 'length'?
`x`	Optional vector for x-axis
`y`	Optional vector for y-axis
`Stock`	Optional Stock object. If provided, average length-at-maturity is included on plot for reference.
`FstYr`	Optional value for first historical year. If empty, user must specify the year in console.
`SelYears`	Optional vector of values for each year where selectivity pattern changed. If empty, user must specify the years in console (comma separated).

`ChooseEffort`	Interactive plot which allows users to specify the relative trajectory and variability in the historical fishing effort and populates Fleet object.
`ChooseM`	Interactive plot which allows users to specify M by age or size class
`ChooseSelect`	Input the first historical year, and all years where selectivity pattern changed (separated by comma). Interactive plot which allows users to specify a range for the length at 5\ selectivity at maximum length for each year. Produces a simple plot which shows the range in selectivity pattern for each break-point year. Selectivity-at-length is fixed in between break-point years. Note that this function replaces 'nyears' in the Fleet object with the value defined here (FstYr:current year).