StarSalmon-package: StarSalmon: Functions for writing commands and post...
In DanteBortone/StarSalmon: Functions for writing commands and post processing the Star Salmon pipeline.
StarSalmon-package R Documentation
StarSalmon: Functions for writing commands and post processing the Star Salmon pipeline.
Description
Given a sample data matrix that indicate the sample name, sample folder name and input paths
this script can write out pipeline commands to run star salmon on the cluster and post process the
data into ucsc_isoform_counts.tsv and hgnc_entrezid_gene_counts.tsv. Only ucsc pipeline outputs
are handled at this time.
Author(s)
Maintainer: Dante Bortone dantebortone@gmail.com
See Also
Useful links:
Report bugs at https://github.com/DanteBortone/StarSalmon/issues
DanteBortone/StarSalmon documentation built on Aug. 16, 2022, 9:33 a.m.
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| StarSalmon-package | R Documentation |
StarSalmon: Functions for writing commands and post processing the Star Salmon pipeline.
Description
Given a sample data matrix that indicate the sample name, sample folder name and input paths this script can write out pipeline commands to run star salmon on the cluster and post process the data into ucsc_isoform_counts.tsv and hgnc_entrezid_gene_counts.tsv. Only ucsc pipeline outputs are handled at this time.
Author(s)
Maintainer: Dante Bortone dantebortone@gmail.com
See Also
Useful links:
Report bugs at https://github.com/DanteBortone/StarSalmon/issues
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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