coverage_bar_plot: Generates a bar plot of identified residues for a specific...

In EMSL-Computing/pspecterlib: PSpecteR Library - Visualization tools for top-down and bottom-up proteomics data

Generates a bar plot of identified residues for a specific protein

Description

Generates a bar plot of counts of identified residues across fragments for a specific protein

Usage

coverage_bar_plot(PeptideCoverage, Interactive = FALSE)

Arguments

PeptideCoverage	A peptide_coverage object generate by get_peptide_coverage. Required.
Interactive	A TRUE/FALSE to indicate whether the plot should be interactive or not. Default is FALSE.

Examples

## Not run: 

# Make Peptide Coverage Object
PeptideCoverage <- get_peptide_coverage(ScanMetadata = BU_ScanMetadata, ProteinTable = ProteinTable, ProteinID = "SO_0225")

# Generate peptide coverage plot
coverage_bar_plot(PeptideCoverage)
coverage_bar_plot(PeptideCoverage, Interactive = TRUE)


## End(Not run)

EMSL-Computing/pspecterlib documentation built on Jan. 28, 2024, 8:13 p.m.