tests/test.R

library(tidyverse)
load(file = 'temp/normalized_matrix_no_T3.rda')
count_matrix <- normalized_matrix_no_T3

# get_pathway_namelist('data/example.xlsx')
subset_count_maxtrix(count_matrix , 'data/overlap.csv')
# #
hmplot(count_matrix , 'data/overlap.csv', file = 'heatmap1.pdf')

get_pathway_namelist(fileName = 'data/overlap.csv')
reduce(list, union)

#
# autoHeatmap::perth_table_trans(data = 'data/trans_demo.xlsx')
# p <- autoHeatmap::perth_table_trans(data = 'data/trans_demo.xlsx')
#
FDUguchunhui/autoHeatmap documentation built on Jan. 17, 2020, 1:44 a.m.