Man pages for GuangchuangYu/DOSE
Disease Ontology Semantic and Enrichment analysis

clusterSimclusterSim
computeICcompute information content
DataSetDatasets
DOSE-packageDisease Ontology Semantic and Enrichment analysis Implemented...
doSimdoSim
enrichDGNEnrichment analysis based on the DisGeNET (<URL:...
enrichDGNvenrichDGN
enrichDODO Enrichment Analysis
enricher_internalenrich.internal
enrichNCGenrichNCG
enrichResult-classClass "enrichResult" This class represents the result of...
EXTID2NAMEEXTID2NAME
fortify.enrichResultfortify
gene2DOconvert Gene ID to DO Terms
geneIDgeneID generic
geneInCategorygeneInCategory generic
geneSimgeneSim
GSEA_internalGSEA_internal
gseaResult-classClass "gseaResult" This class represents the result of GSEA...
gseDGNDisGeNET Gene Set Enrichment Analysis
gseDODO Gene Set Enrichment Analysis
gseNCGNCG Gene Set Enrichment Analysis
gsfiltergsfilter
mclusterSimmclusterSim
rebuildAnnoDatarebuiding annotation data
reexportsObjects exported from other packages
setReadablesetReadable
show-methodsshow method
simplotsimplot
summary-methodssummary method
theme_dosetheme_dose
GuangchuangYu/DOSE documentation built on Oct. 1, 2018, 7:20 p.m.