Man pages for GuangchuangYu/DOSE
Disease Ontology Semantic and Enrichment analysis

clusterSimclusterSim
compareClusterResult-classClass "compareClusterResult" This class represents the...
computeICcompute information content
DataSetDatasets
DOSE-packageDisease Ontology Semantic and Enrichment analysis Implemented...
doSimdoSim
enrichDGNEnrichment analysis based on the DisGeNET (<URL:...
enrichDGNvenrichDGN
enrichDODO Enrichment Analysis
enricher_internalenrich.internal
enrichNCGenrichNCG
enrichResult-classClass "enrichResult" This class represents the result of...
EXTID2NAMEEXTID2NAME
fortify.enrichResultfortify
gene2DOconvert Gene ID to DO Terms
geneIDgeneID generic
geneInCategorygeneInCategory generic
geneSimgeneSim
GSEA_internalGSEA_internal
gseaResult-classClass "gseaResult" This class represents the result of GSEA...
gseDGNDisGeNET Gene Set Enrichment Analysis
gseDODO Gene Set Enrichment Analysis
gseNCGNCG Gene Set Enrichment Analysis
gsfiltergsfilter
mclusterSimmclusterSim
parse_ratioparse_ratio
rebuildAnnoDatarebuiding annotation data
reexportsObjects exported from other packages
setReadablesetReadable
show-methodsshow method
simplotsimplot
summary-methodssummary method
theme_dosetheme_dose
GuangchuangYu/DOSE documentation built on Nov. 6, 2019, 10:18 a.m.