Man pages for GuangchuangYu/clusterProfiler
A universal enrichment tool for interpreting omics data

append_kegg_categoryappend_kegg_category
bitrbitr
bitr_keggbitr_kegg
browseKEGGbrowseKEGG
clusterProfiler-packageclusterProfiler: A universal enrichment tool for interpreting...
compareClusterCompare gene clusters functional profile
DataSetDatasets gcSample contains a sample of gene clusters.
download_KEGGdownload_KEGG
dropGOdropGO
enrichDAVIDenrichDAVID
enricherenricher
enrichGOGO Enrichment Analysis of a gene set. Given a vector of...
enrichKEGGKEGG Enrichment Analysis of a gene set. Given a vector of...
enrichMKEGGKEGG Module Enrichment Analysis of a gene set. Given a vector...
enrichPCenrichPC
enrichWPenrichWP
getPPIgetPPI
getTaxIDgetTaxID
getTaxInfogetTaxInfo
get_wp_organismsget_wp_organism
Gff2GeneTableGff2GeneTable
go2ontgo2ont
go2termgo2term
gofiltergofilter
groupGOFunctional Profile of a gene set at specific GO level. Given...
groupGOResult-classClass "groupGOResult" This class represents the result of...
GSEAGSEA
gseGOgseGO
gseKEGGgseKEGG
gseMKEGGgseMKEGG
gsePCgsePC
gseWPgseWP
gson_GOgson_KEGG
gson_KEGGgson_KEGG
gson_KEGG_mapperBuild KEGG annotation for novel species using KEGG Mapper
gson_WPgson_WP
idTypeidType
ko2nameko2name
merge_resultmerge_result
plotGOgraphplotGOgraph
read.gmt.pcread.gmt.pc
reexportsObjects exported from other packages
search_kegg_organismsearch_kegg_organism
simplify-methodssimplify method
uniprot_getuniprot_get
GuangchuangYu/clusterProfiler documentation built on March 7, 2024, 9:31 a.m.