Man pages for GuangchuangYu/clusterProfiler
statistical analysis and visualization of functional profiles for genes and gene clusters

bitrbitr
bitr_keggbitr_kegg
browseKEGGbrowseKEGG
buildGOmapbuildGOmap
clusterProfiler-packagestatistical analysis and visualization of functional profiles...
compareClusterCompare gene clusters functional profile
DataSetDatasets gcSample contains a sample of gene clusters.
download_KEGGdownload_KEGG
dropGOdropGO
enrichDAVIDenrichDAVID
enricherenricher
enrichGOGO Enrichment Analysis of a gene set. Given a vector of...
enrichKEGGKEGG Enrichment Analysis of a gene set. Given a vector of...
enrichMKEGGKEGG Module Enrichment Analysis of a gene set. Given a vector...
Gff2GeneTableGff2GeneTable
go2ontgo2ont
go2termgo2term
gofiltergofilter
groupGOFunctional Profile of a gene set at specific GO level. Given...
groupGOResult-classClass "groupGOResult" This class represents the result of...
GSEAGSEA
gseGOgseGO
gseKEGGgseKEGG
gseMKEGGgseMKEGG
idTypeidType
KEGG_path2extidKEGG_path2extid
ko2nameko2name
merge_resultmerge_result
plotGOgraphplotGOgraph
read.gmtread.gmt
reexportsObjects exported from other packages
search_kegg_organismsearch_kegg_organism
simplify-methodssimplify method
uniprot_getuniprot_get
viewKEGGviewKEGG function is for visualize KEGG pathways works with...
GuangchuangYu/clusterProfiler documentation built on Nov. 6, 2019, 10:42 a.m.