run_diffcyt: ...

Description Usage Arguments Author(s)

View source: R/run_diffcyt.R

Description

...

Usage

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run_diffcyt(x, group = "group", k = NULL, data = c("counts",
  "normcounts"), log = FALSE, method = c("limma", "LMM"),
  fun = c("mean", "median"))

Arguments

x

a daFrame.

group

a character string specifying the grouping variable.

data

character string specifying the data to use. Should be one of assayNames(x).

log

logical. Should log2 be taken before computing means/medians.

method

a character string.

fun

character string specifying the summary statistic to use.

Author(s)

Helena Lucia Crowell


HelenaLC/ddSingleCell documentation built on Dec. 7, 2018, 7:54 a.m.