Files in HenrikBengtsson/ACNE
Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
.Rbuildignore
.github/workflows/R-CMD-check.yaml
.github/workflows/covr.yaml
.gitignore
.make/Makefile
DESCRIPTION
Makefile
NAMESPACE
NEWS.md
R/000.R
R/999.NonDocumentedObjects.R
R/999.package.R
R/NmfPlm.R
R/NmfSnpPlm.R
R/SnpNmfFit.plot.R
R/WHInit.R
R/doACNE.R
R/fitSnpNmf.R
R/fitSnpNmfArray.R
R/miqr.solve.R
R/plotFreqB.R
R/pseudoinverse.R
R/removeOutliers.R
R/robustHInit.R
R/robustWInit.R
R/snpArrayToMatrix.R
R/zzz.R
README.md
cran-comments.md
incl/999.missingdocs.txt
incl/OrtizM_etal_2010.Rd
incl/fitSnpNmfArray.Rex
incl/snpArrayToMatrix.Rex
inst/CITATION
inst/extData/V1.Rbin
inst/extData/V2.Rbin
inst/extData/V3.Rbin
inst/extData/V4.Rbin
inst/extData/V5.Rbin
inst/extData/V6.Rbin
inst/testScripts/system/chipTypes/Mapping10K_Xba142/test20090128,10K,NMF.R
inst/testScripts/system/chipTypes/Mapping10K_Xba142/test20100517,10K,doACNE.R
inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/test20090128,250K,TumorNormal,NMF.R
inst/testScripts/system/chipTypes/Mapping250K_Nsp,Sty/test20100517,250K,doACNE.R
inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20090122,50K,NMF,freqB.R
inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20090128,50K,NMF.R
inst/testScripts/system/chipTypes/Mapping50K_Hind240,Xba240/test20100517,50K,doACNE.R
man/ACNE-package.Rd
man/NmfPlm.Rd
man/NmfSnpPlm.Rd
man/Non-documented_objects.Rd
man/WHInit.Rd
man/doACNE.Rd
man/fitSnpNmf.Rd
man/fitSnpNmfArray.Rd
man/plot.SnpNmfFit.Rd
man/pseudoinverse.Rd
man/removeOutliers.Rd
man/robustHInit.Rd
man/robustWInit.Rd
man/snpArrayToMatrix.Rd
tests/fitSnpNmfArray.R
