HenrikBengtsson/aroma.cn: Copy-Number Analysis of Large Microarray Data Sets

Methods for analyzing DNA copy-number data. Specifically, this package implements the multi-source copy-number normalization (MSCN) method for normalizing copy-number data obtained on various platforms and technologies. It also implements the TumorBoost method for normalizing paired tumor-normal SNP data.

Getting started

Package details

Bioconductor views CopyNumberVariants DataImport DataRepresentation Microarray OneChannel Preprocessing ProprietaryPlatforms QualityControl SNP TwoChannel aCGH
LicenseLGPL (>= 2.1)
URL https://www.aroma-project.org/ https://github.com/HenrikBengtsson/aroma.cn
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
HenrikBengtsson/aroma.cn documentation built on Dec. 26, 2019, 5:18 p.m.