Files in INBO-Natura2000/n2kanalysis

Generic Functions to Analyse Data from the 'Natura 2000' Monitoring

.Rbuildignore

.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md

.github/workflows/check_on_branch.yml

.github/workflows/check_on_different_r_os.yml

.github/workflows/check_on_main.yml

.github/workflows/release.yml

.gitignore

.zenodo.json

CITATION.cff

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS.md R/combine.R R/combine_result.R R/delete_model.R R/display.R R/extract.R R/fit_every_model.R R/fit_model.R R/fit_model_character.R R/fit_model_n2k_aggregate.R R/fit_model_n2k_composite.R R/fit_model_n2k_hurdle_imputed.R R/fit_model_n2k_inla.R R/fit_model_n2k_inla_comparison.R R/fit_model_n2k_manifest.R R/fit_model_n2k_model_imputed.R R/fit_model_s3_object.R R/get_analysis_date.R R/get_analysis_version.R R/get_anomaly.R R/get_anomaly_n2k_inla.R R/get_anomaly_n2k_model.R R/get_data.R R/get_file_fingerprint.R R/get_formula.R R/get_location_group_id.R R/get_model.R R/get_model_parameter.R R/get_model_parameter_n2k_aggregated.R R/get_model_parameter_n2k_composite.R R/get_model_parameter_n2k_hurdle_imputed.R R/get_model_parameter_n2k_inla.R R/get_model_parameter_n2k_inla_comparison.R R/get_model_parameter_n2k_model_imputed.R R/get_model_type.R R/get_parents.R R/get_result.R R/get_result_character.R R/get_result_n2k_inla.R R/get_result_n2k_model.R R/get_result_n2kmanifest.R R/get_result_s3_object.R R/get_scheme_id.R R/get_seed.R R/get_species_group_id.R R/get_status_fingerprint.R R/import_s3_classes.R R/inla_inverse.R R/manifest_yaml_to_bash.R R/mark_obsolete_dataset.R R/n2k_aggregate_class.R R/n2k_aggregated.R R/n2k_analysis_metadata_class.R R/n2k_analysis_version_class.R R/n2k_anomaly_class.R R/n2k_composite.R R/n2k_composite_class.R R/n2k_contrast_class.R R/n2k_hurdle_imputed.R R/n2k_hurdle_imputed_class.R R/n2k_import.R R/n2k_import_class.R R/n2k_inla.R R/n2k_inla_class.R R/n2k_inla_comparison.R R/n2k_inla_comparison_class.R R/n2k_manifest.R R/n2k_manifest_class.R R/n2k_model_class.R R/n2k_model_imputed.R R/n2k_model_imputed_class.R R/n2k_parameter_class.R R/n2k_result_class.R R/parent_status.R R/read_manifest.R R/read_model.R R/read_result.R R/result_estimate.R R/result_estimate_character.R R/result_estimate_n2k_result.R R/result_metadata.R R/result_metadata_character.R R/result_metadata_n2k_result.R R/select_factor_count_strictly_positive.R R/select_factor_treshold.R R/select_observed_range.R R/session_package.R R/sha1.R R/status.R R/store_manifest.R R/store_manifest_yaml.R R/store_model.R R/union.R R/valid_object.R README.md

_pkgdown.yml

checklist.yml

codecov.yml

inst/CITATION

inst/en_gb.dic

man-roxygen/analysis_metadata.R man/combine.Rd man/delete_model.Rd man/display.Rd man/extract.Rd

man/figures/background-pattern.png

man/figures/flanders.woff

man/figures/flanders.woff2

man/figures/logo-en.png

man/fit_every_model.Rd man/fit_model.Rd man/get_analysis_date.Rd man/get_analysis_version.Rd man/get_anomaly.Rd man/get_data.Rd man/get_file_fingerprint.Rd man/get_formula.Rd man/get_location_group_id.Rd man/get_model.Rd man/get_model_parameter.Rd man/get_model_type.Rd man/get_parents.Rd man/get_result.Rd man/get_scheme_id.Rd man/get_seed.Rd man/get_species_group_id.Rd man/get_status_fingerprint.Rd man/inla_inverse.Rd man/manifest_yaml_to_bash.Rd man/mark_obsolete_dataset.Rd man/n2kAggregate-class.Rd man/n2kAnalysisMetadata-class.Rd man/n2kAnalysisVersion-class.Rd man/n2kAnomaly-class.Rd man/n2kComposite-class.Rd man/n2kContrast-class.Rd man/n2kHurdleImputed-class.Rd man/n2kImport-class.Rd man/n2kInla-class.Rd man/n2kInlaComparison-class.Rd man/n2kManifest-class.Rd man/n2kModel-class.Rd man/n2kModelImputed-class.Rd man/n2kParameter-class.Rd man/n2kResult-class.Rd man/n2k_aggregate.Rd man/n2k_composite.Rd man/n2k_hurdle_imputed.Rd man/n2k_import.Rd man/n2k_inla.Rd man/n2k_inla_comparison.Rd man/n2k_manifest.Rd man/n2k_model_imputed.Rd man/parent_status.Rd man/parent_status_change.Rd man/read_manifest.Rd man/read_model.Rd man/read_result.Rd man/reexports.Rd man/result_estimate.Rd man/result_metadata.Rd man/select_factor_count_strictly_positive.Rd man/select_factor_threshold.Rd man/select_observed_range.Rd man/session_package.Rd man/status.Rd man/status_change.Rd man/store_manifest.Rd man/store_manifest_yaml.Rd man/store_model.Rd man/union.Rd man/validObject.Rd

n2kanalysis.Rproj

pkgdown/extra.css

tests/testthat.R

tests/testthat/.gitignore

tests/testthat/helper_test_data.R tests/testthat/test_aaa_get_analysis_version.R tests/testthat/test_aaa_n2k_manifest.R tests/testthat/test_aaa_select_factor_count_strictly_positive.R tests/testthat/test_aaa_select_factor_treshold.R tests/testthat/test_aaa_select_observed_range.R tests/testthat/test_aaa_validobject.R tests/testthat/test_aaaa_clean_bucket.R tests/testthat/test_aba_n2k_import.R tests/testthat/test_aba_n2k_inla.R tests/testthat/test_aba_n2k_inla_accessor.R tests/testthat/test_aba_n2k_inla_validation.R tests/testthat/test_aca_n2k_aggregate.R tests/testthat/test_aca_n2k_anomaly.R tests/testthat/test_aca_n2k_model_accessor.R tests/testthat/test_baa_get_file_fingerprint.R tests/testthat/test_baa_store_manifest.R tests/testthat/test_bba_read_manifest.R tests/testthat/test_bba_store_model.R tests/testthat/test_bbb_store_manifest_yaml.R tests/testthat/test_bbc_read_model.R tests/testthat/test_caa_fit_model.R tests/testthat/test_cba_fit_model_manifest.R tests/testthat/test_cba_model_impute.R tests/testthat/test_daa_get_model_parameter.R tests/testthat/test_daa_get_status_fingerprint.R tests/testthat/test_eaa_get_result.R

vignettes/.gitignore

vignettes/workflow.Rmd

INBO-Natura2000/n2kanalysis documentation built on Feb. 15, 2024, 11:24 a.m.