Files in InnovationValueInitiative/hesim

Health Economic Simulation Modeling and Decision Analysis

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.github/.gitignore

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.github/workflows/pkgdown.yaml

.github/workflows/pr-commands.yaml

.github/workflows/test-coverage.yaml

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DESCRIPTION

Doxyfile

DoxygenLayout.xml

NAMESPACE

NEWS.md R/RcppExports.R R/bootstrap.R R/cea.R R/ctstm.R R/data.R R/deprecated.R R/distributions.R R/dtstm.R R/hesim.R R/hesim_data.R R/input_mats.R R/model-fits.R R/model_def.R R/params.R R/params_lm.R R/params_mlogit.R R/params_mlogit_list.R R/params_surv.R R/params_surv_list.R R/plot.R R/psm.R R/rand.R R/sim-general.R R/statevals.R R/summarize.R R/tparams.R R/tparams_mean.R R/tparams_transprobs.R R/tpmatrix.R R/utils.R README.Rmd README.md cran-comments.md data-raw/mstate3_exdata.R data-raw/multinom3_exdata.R data-raw/onc3.R data-raw/psm4_exdata.R

data/mstate3_exdata.rda

data/multinom3_exdata.rda

data/onc3.rda

data/onc3p.rda

data/psm4_exdata.rda

inst/CITATION

inst/include/hesim.h

inst/include/hesim/Rbase/integrate.h

inst/include/hesim/Rbase/zeroin.h

inst/include/hesim/check_R_infinity.h

inst/include/hesim/ctstm/ctstm.h

inst/include/hesim/ctstm/indiv-ctstm.h

inst/include/hesim/dtstm.h

inst/include/hesim/math/composite.h

inst/include/hesim/math/quad.h

inst/include/hesim/math/riemann.h

inst/include/hesim/psm.h

inst/include/hesim/statevals.h

inst/include/hesim/statmods/obs_index.h

inst/include/hesim/statmods/params.h

inst/include/hesim/statmods/statmods.h

inst/include/hesim/stats/distributions.h

inst/include/hesim/stats/mean.h

inst/include/hesim/stats/rtrunc.h

inst/include/hesim/stats/survfuns.h

inst/include/hesim/time_fun.h

inst/include/hesim/utils.h

man-roxygen/details-create_disease_model.R man-roxygen/example-CohortDtstm.R man-roxygen/example-CohortDtstmTrans.R man-roxygen/example-IndivCtstm.R man-roxygen/example-IndivCtstmTrans.R man-roxygen/example-Psm.R man-roxygen/example-PsmCurves.R man-roxygen/example-StateVals.R man-roxygen/example-create_StateVals.lm.R man-roxygen/example-create_input_mats.R man-roxygen/example-input_mats.R man-roxygen/example-sim_ev.stateprobs.R man-roxygen/example-tparams_mean.R man-roxygen/example-tparams_transprobs.R man/CohortDtstm.Rd man/CohortDtstmTrans.Rd man/CtstmTrans.Rd man/IndivCtstm.Rd man/IndivCtstmTrans.Rd man/Psm.Rd man/PsmCurves.Rd man/StateVals.Rd man/absorbing.Rd man/apply_rr.Rd man/as.data.table.tparams_transprobs.Rd man/as_array3.Rd man/as_pfs_os.Rd man/autoplot.stateprobs.Rd man/autoplot.survival.Rd man/bootstrap.Rd man/ce.Rd man/cea.Rd man/check.Rd man/check_input_data.Rd man/costs.Rd man/create_CohortDtstm.Rd man/create_CohortDtstmTrans.Rd man/create_IndivCtstmTrans.Rd man/create_PsmCurves.Rd man/create_StateVals.Rd man/create_input_mats.Rd man/create_input_mats.formula_list.Rd man/create_lines_dt.Rd man/create_object_list.Rd man/create_params.Rd man/create_trans_dt.Rd man/define_model.Rd man/define_rng.Rd man/define_tparams.Rd man/disprog.Rd man/expand.Rd man/expand.hesim_data.Rd man/expmat.Rd man/fast_rgengamma.Rd

man/figures/logo.png

man/flexsurvreg_list.Rd man/formula_list.Rd man/get_labels.Rd man/hesim.Rd man/hesim_data.Rd man/hesim_survdists.Rd man/icea.Rd man/icer.Rd man/icer_tbl.Rd man/id_attributes.Rd man/incr_effect.Rd man/input_mats.Rd man/lm_list.Rd man/mom_beta.Rd man/mom_gamma.Rd man/mstate3_exdata.Rd man/multinom3_exdata.Rd man/multinom_list.Rd man/normboot.Rd man/onc3.Rd man/onc3p.Rd man/params.Rd man/params_lm.Rd man/params_mlogit.Rd man/params_mlogit_list.Rd man/params_surv.Rd man/params_surv_list.Rd man/partsurvfit.Rd man/plot_ceac.Rd man/plot_ceaf.Rd man/plot_ceplane.Rd man/plot_evpi.Rd man/psm4_exdata.Rd man/qalys.Rd man/qmatrix.Rd man/qmatrix.matrix.Rd man/qmatrix.msm.Rd man/rcat.Rd man/rdirichlet_mat.Rd man/reexports.Rd man/rng_distributions.Rd man/rpwexp.Rd man/set_labels.Rd man/sim_ev.Rd man/sim_stateprobs.Rd man/sim_stateprobs.survival.Rd man/stateprobs.Rd man/stateval_tbl.Rd man/summarize_ce.Rd man/summary.ce.Rd man/summary.eval_rng.Rd man/summary.params.Rd man/summary.tparams_mean.Rd man/summary.tparams_transprobs.Rd man/summary.tpmatrix.Rd man/surv_quantile.Rd man/survival.Rd man/time_intervals.Rd man/tparams.Rd man/tparams_mean.Rd man/tparams_transprobs.Rd man/tpmatrix.Rd man/tpmatrix_id.Rd man/tpmatrix_names.Rd man/uv_rng.Rd man/weibullNMA.Rd

pkgdown/_pkgdown.yml

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src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/apply_rr.cpp

src/cea.cpp

src/ctstm.cpp

src/distributions.cpp

src/dtstm.cpp

src/indiv-ctstm.cpp

src/psm.cpp

src/statevals.cpp

src/test-composite.cpp

src/test-ctstm.cpp

src/test-distributions.cpp

src/test-obs_index.cpp

src/test-quad.cpp

src/test-riemann.cpp

src/test-rtrunc.cpp

src/test-survfuns.cpp

src/test-utils.cpp

src/test-zeroin.cpp

src/utils.cpp

tests/manual/README

tests/manual/README.md

tests/manual/figs/README

tests/manual/figs/pwexp_trandom_comp.pdf tests/manual/figs/stprobs-ictstm-forward-hesim-vs-mstate.pdf tests/manual/figs/stprobs-ictstm-reset-hesim-vs-mstate.pdf tests/manual/figs/stprobs-reset-fracpoly-invcdf-quad.pdf tests/manual/figs/stprobs-reset-fracpoly-invcdf-riemann.pdf tests/manual/figs/stprobs-reset-fracpoly-sample-riemann.pdf tests/manual/test-manual.R tests/testthat.R tests/testthat/helpers.R tests/testthat/test-bootstrap.R tests/testthat/test-cea.R tests/testthat/test-cpp-composite.R tests/testthat/test-cpp-ctstm.R tests/testthat/test-cpp-distributions.R tests/testthat/test-cpp-obs_index.R tests/testthat/test-cpp-quad.R tests/testthat/test-cpp-riemann.R tests/testthat/test-cpp-rtrunc.R tests/testthat/test-cpp-utils.R tests/testthat/test-cpp-zeroin.R tests/testthat/test-ctstm.R tests/testthat/test-data.R tests/testthat/test-distributions.R tests/testthat/test-dtstm.R tests/testthat/test-hesim_data.R tests/testthat/test-input_mats.R tests/testthat/test-model-fits.R tests/testthat/test-model_def.R tests/testthat/test-params_lm.R tests/testthat/test-params_mlogit.R tests/testthat/test-params_mlogit_list.R tests/testthat/test-params_surv.R tests/testthat/test-params_surv_list.R tests/testthat/test-plot.R tests/testthat/test-psm.R tests/testthat/test-rand.R tests/testthat/test-sim-general.R tests/testthat/test-statevals.R tests/testthat/test-summarize.R tests/testthat/test-tparams_mean.R tests/testthat/test-tpmatrix.R tests/testthat/test-utils.R vignettes/README.md vignettes/benchmarks.R vignettes/benchmarks.Rmd

vignettes/benchmarks.Rmd.orig

vignettes/benchmarks_figs/SemiMarkov-1.png

vignettes/cea.Rmd

vignettes/econ-eval-process-hesim.png

vignettes/figures.gslides

vignettes/illness-death.png

vignettes/intro.Rmd vignettes/markov-cohort.Rmd

vignettes/markov-cohort.png

vignettes/markov-inhomogeneous-cohort.Rmd vignettes/markov-inhomogeneous-indiv.Rmd

vignettes/markov-inhomogeneous.png

vignettes/mlogit.Rmd vignettes/mstate.Rmd vignettes/precompile.R vignettes/psm.Rmd

vignettes/references.bib

vignettes/reversible-illness-death.png

InnovationValueInitiative/hesim documentation built on Feb. 12, 2024, 10:39 p.m.