Shiny app allowing the user to evaluate the F score for all the populations within a Reference File used as Input by comparing it to an output file containing clusters generated by a clustering or overclustering algorithm.
install.packages(c("shiny", "shinyjs", "shinydashboard", "stats, "devtools", "microbenchmark", "gplots"))
source("https://bioconductor.org/biocLite.R")
biocLite("Biobase")
biocLite("flowCore")
biocLite("ggcyto")
You may be asked to reload your environment, if so, accept.
library("devtools")
install_github("isambens/clustering-methods-benchmarking")
library("MethodsBenchmarking")
MethodsBenchmarking.run()
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