Jfortin1/crisprBase: Base functions and classes for CRISPR gRNA design

Provides S4 classes for general nucleases, CRISPR nucleases and base editors. Several CRISPR-specific genome arithmetic functions are implemented to help extract genomic coordinates of spacer and protospacer sequences. Commonly-used CRISPR nuclease objects are provided that can be readily used in other packages. Both DNA- and RNA-targeting nucleases are supported.

Getting started

Package details

Bioconductor views CRISPR FunctionalGenomics
LicenseMIT + file LICENSE
URL https://github.com/Jfortin1/crisprBase
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Jfortin1/crisprBase documentation built on June 15, 2022, 12:29 a.m.